LINC02363

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, LINC02363 mutation is significantly associated with the RNA expression of many other genes, with 24 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible LINC02363-associated genes across cancer lineages are MIR3649, MIR425, and RNU6-1082P. Each is linked with LINC02363 in more than 1 cancer types. Because this analysis shows association rather than direction, both LINC02363-to-partner and partner-to-LINC02363 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, MIR3649 grouped by LINC02363-low versus LINC02363-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC02363→partner) and Y-score (partner→LINC02363) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECMIR3649 →+1.035+4.302.001.00831
UCECMIR425 →+0.753+4.499.001.00531
UCECRNU6-1082P →+0.441+4.551<.001.00931
UCECSNORD116-16 →+0.672+4.188.007.00931
UCECMIR517C →+0.627+5.722<.001.00131
UCECTRAJ57 →+1.137+4.903<.001.00231
Each partner links to its Q-omics profile. Showing the 6 strongest of 24 associations by consensus.

MIR3649 by LINC02363 expression — UCEC

Box plot of MIR3649 in LINC02363-low vs LINC02363-high samples in UCEC.

Explore this box plot interactively →

Exploration