LINC02343

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, LINC02343 RNA expression is significantly associated with the protein abundance of many other proteins, with 7,704 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible LINC02343-associated proteins across cancer lineages are PTER, NBEA, and CYP4X1. Each is linked with LINC02343 in more than 2 cancer types. Because this analysis shows association rather than direction, both LINC02343-to-partner and partner-to-LINC02343 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC02343 versus PTER in BRCA, with a Pearson correlation of 0.30.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC02343→partner) and Y-score (partner→LINC02343) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCAPTER →+0.616+1.155<.001<.00133
BRCANBEA →+0.535+0.928<.001<.00133
OVCYP4X1 →+0.932+0.125.003.00433
BRCAATRX_S1527 →-0.722-1.070<.001<.00133
UCECACSS3 →+0.808+0.743<.001<.00133
BRCATOLLIP →+0.250+0.900<.001<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 7,704 associations by consensus.

LINC02343 vs PTER — BRCA

Per-sample scatter of LINC02343 vs PTER in BRCA (Pearson r = 0.30).

Explore this scatter interactively →

Exploration