LINC02339

Across TCGA patient cohorts, LINC02339 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,276 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC02339-associated GO terms across cancer lineages are Learning, Nucleoside phosphate catabolic process, and Neuron projection extension. Each is linked with LINC02339 in more than 6 cancer types. Because this analysis shows association rather than direction, both LINC02339-to-partner and partner-to-LINC02339 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Learning grouped by LINC02339-low versus LINC02339-high in LGG.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC02339→partner) and Y-score (partner→LINC02339) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LGG	Learning →	+0.039	+0.339	<.001	<.001	3	7
STAD	Nucleoside phosphate catabolic process →	+0.079	+0.029	<.001	<.001	3	6
STAD	Neuron projection extension →	+0.071	+0.032	<.001	<.001	3	6
STAD	Regulation of cation channel activity →	+0.037	+0.031	<.001	<.001	3	6
STAD	Ribose phosphate biosynthetic process →	+0.110	+0.049	<.001	<.001	3	6
STAD	Phosphatidic acid metabolic process →	+0.065	+0.029	<.001	<.001	3	6

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,276 associations by consensus.

Learning by LINC02339 expression — LGG

Explore this box plot interactively →