LINC02288

Across TCGA patient cohorts, LINC02288 RNA expression is significantly associated with the protein abundance of many other proteins, with 10,768 significant associations in total. CCRCC shows the largest number of these associations.

The most reproducible LINC02288-associated proteins across cancer lineages are CCDC47, PGM5, and PRKCD_S299. Each is linked with LINC02288 in more than 2 cancer types. Because this analysis shows association rather than direction, both LINC02288-to-partner and partner-to-LINC02288 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC02288 versus CCDC47 in CCRCC, with a Pearson correlation of -0.29.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC02288→partner) and Y-score (partner→LINC02288) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
CCRCC	CCDC47 →	-0.243	-0.344	<.001	<.001	3	3
BRCA	PGM5 →	+0.539	+0.079	<.001	.001	3	3
LSCC	PRKCD_S299 →	-0.706	-0.119	.008	.006	3	3
LUAD	PRR5_S240 →	-0.614	-0.457	<.001	<.001	3	3
LSCC	RASIP1_S326 →	+0.649	+0.134	<.001	.009	3	3
CCRCC	ASNS →	-0.402	-0.293	<.001	<.001	3	3

Each partner links to its Q-omics profile. Showing the 6 strongest of 10,768 associations by consensus.

LINC02288 vs CCDC47 — CCRCC

Explore this scatter interactively →