LINC02260

Across TCGA patient cohorts, LINC02260 RNA expression is significantly associated with the go_rna of many other GO terms, with 5,307 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC02260-associated GO terms across cancer lineages are Pigment accumulation, Regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay, and Embryonic hemopoiesis. Each is linked with LINC02260 in more than 6 cancer types. Because this analysis shows association rather than direction, both LINC02260-to-partner and partner-to-LINC02260 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Pigment accumulation grouped by LINC02260-low versus LINC02260-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC02260→partner) and Y-score (partner→LINC02260) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Pigment accumulation →	+0.063	+0.037	<.001	<.001	3	5
STAD	Regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay →	+0.063	+0.051	<.001	.001	3	5
TGCT	Embryonic hemopoiesis →	+0.053	+0.209	<.001	<.001	3	5
ESCA	Pigment metabolic process →	+0.057	+0.043	<.001	.004	1	7
STAD	tRNA metabolic process →	+0.070	+0.046	<.001	<.001	2	6
STAD	Folic acid-containing compound metabolic process →	+0.055	+0.040	<.001	<.001	3	5

Each partner links to its Q-omics profile. Showing the 6 strongest of 5,307 associations by consensus.

Pigment accumulation by LINC02260 expression — STAD

Explore this box plot interactively →