LINC02248

Across TCGA patient cohorts, LINC02248 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,505 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC02248-associated GO terms across cancer lineages are Vesicle localization, Positive regulation of microtubule nucleation, and Synaptic vesicle localization. Each is linked with LINC02248 in more than 8 cancer types. Because this analysis shows association rather than direction, both LINC02248-to-partner and partner-to-LINC02248 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Vesicle localization grouped by LINC02248-low versus LINC02248-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC02248→partner) and Y-score (partner→LINC02248) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Vesicle localization →	+0.104	+0.073	<.001	<.001	3	9
STAD	Positive regulation of microtubule nucleation →	+0.091	+0.063	<.001	<.001	3	9
STAD	Synaptic vesicle localization →	+0.069	+0.069	<.001	<.001	3	8
STAD	Transport along microtubule →	+0.099	+0.082	<.001	<.001	3	8
STAD	Axo-dendritic transport →	+0.099	+0.069	<.001	<.001	3	8
STAD	Regulation of microtubule polymerization →	+0.102	+0.070	<.001	<.001	3	8

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,505 associations by consensus.

Vesicle localization by LINC02248 expression — STAD

Explore this box plot interactively →