LINC02223

Across TCGA patient cohorts, LINC02223 RNA expression is significantly associated with the RNA expression of many other genes, with 7,292 significant associations in total. LGG shows the largest number of these associations.

The most reproducible LINC02223-associated genes across cancer lineages are BASP1-AS1, BASP1, and METTL11B. Each is linked with LINC02223 in more than 18 cancer types. Because this analysis shows association rather than direction, both LINC02223-to-partner and partner-to-LINC02223 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC02223 versus BASP1-AS1 in LGG, with a Pearson correlation of 0.60.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC02223→partner) and Y-score (partner→LINC02223) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LGG	BASP1-AS1 →	+0.913	+0.750	<.001	<.001	3	19
ESCA	BASP1 →	+1.775	+0.186	<.001	<.001	3	17
PAAD	METTL11B →	+0.621	+0.120	<.001	<.001	3	12
GBM	CASC15 →	+0.786	+0.575	<.001	<.001	2	11
PAAD	LINC01705 →	+1.491	+0.172	<.001	.001	3	10
PAAD	RPLP0P2 →	+0.866	+0.174	<.001	.001	3	10

Each partner links to its Q-omics profile. Showing the 6 strongest of 7,292 associations by consensus.

LINC02223 vs BASP1-AS1 — LGG

Explore this scatter interactively →