LINC02223

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, LINC02223 mutation is significantly associated with the RNA expression of many other genes, with 1 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible LINC02223-associated genes across cancer lineages are SDR42E1P4. Each is linked with LINC02223 in more than 1 cancer types. Because this analysis shows association rather than direction, both LINC02223-to-partner and partner-to-LINC02223 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, SDR42E1P4 grouped by LINC02223-low versus LINC02223-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC02223→partner) and Y-score (partner→LINC02223) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECSDR42E1P4 →+0.199+8.066<.001.00731
Each partner links to its Q-omics profile. Showing the 1 strongest of 1 associations by consensus.

SDR42E1P4 by LINC02223 expression — UCEC

Box plot of SDR42E1P4 in LINC02223-low vs LINC02223-high samples in UCEC.

Explore this box plot interactively →

Exploration