LINC02217

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, LINC02217 RNA expression is significantly associated with the protein abundance of many other proteins, with 7,556 significant associations in total. GBM shows the largest number of these associations.

The most reproducible LINC02217-associated proteins across cancer lineages are POLR1A, POLR1B, and FAM207A. Each is linked with LINC02217 in more than 2 cancer types. Because this analysis shows association rather than direction, both LINC02217-to-partner and partner-to-LINC02217 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC02217 versus POLR1A in LSCC, with a Pearson correlation of -0.25.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC02217→partner) and Y-score (partner→LINC02217) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCPOLR1A →-0.193-0.022.003.00333
GBMPOLR1B →-0.372-0.263<.001.00133
PDACFAM207A →-0.377-0.015.002.00933
LUADZBP1_S309 →+0.588+0.017.002.00232
GBMMARCKS_S81 →+0.482+0.138<.001.00332
CCRCCNBEA_S1321 →+0.749+0.018<.001.00332
Each partner links to its Q-omics profile. Showing the 6 strongest of 7,556 associations by consensus.

LINC02217 vs POLR1A — LSCC

Per-sample scatter of LINC02217 vs POLR1A in LSCC (Pearson r = -0.25).

Explore this scatter interactively →

Exploration