LINC02208

Across TCGA patient cohorts, LINC02208 RNA expression is significantly associated with the go_rna of many other GO terms, with 7,004 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC02208-associated GO terms across cancer lineages are Positive regulation of DNA repair, Regulation of DNA-directed DNA polymerase activity, and Regulation of double-strand break repair. Each is linked with LINC02208 in more than 18 cancer types. Because this analysis shows association rather than direction, both LINC02208-to-partner and partner-to-LINC02208 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Positive regulation of DNA repair grouped by LINC02208-low versus LINC02208-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC02208→partner) and Y-score (partner→LINC02208) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Positive regulation of DNA repair →	+0.049	+0.078	<.001	<.001	3	19
GBM	Regulation of DNA-directed DNA polymerase activity →	+0.047	+0.059	<.001	.001	3	18
ESCA	Regulation of double-strand break repair →	+0.063	+0.140	<.001	.002	3	17
STAD	Protein folding →	+0.053	+0.059	<.001	<.001	3	17
ESCA	Mitochondrial membrane organization →	+0.074	+0.158	<.001	<.001	3	17
STAD	Positive regulation of DNA-templated transcription, elongation →	+0.056	+0.061	<.001	<.001	3	17

Each partner links to its Q-omics profile. Showing the 6 strongest of 7,004 associations by consensus.

Positive regulation of DNA repair by LINC02208 expression — STAD

Explore this box plot interactively →