LINC02199

Across TCGA patient cohorts, LINC02199 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,982 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC02199-associated GO terms across cancer lineages are Ribosomal small subunit biogenesis, Nucleus organization, and Recombinational repair. Each is linked with LINC02199 in more than 14 cancer types. Because this analysis shows association rather than direction, both LINC02199-to-partner and partner-to-LINC02199 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Ribosomal small subunit biogenesis grouped by LINC02199-low versus LINC02199-high in ESCA.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC02199→partner) and Y-score (partner→LINC02199) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
ESCA	Ribosomal small subunit biogenesis →	+0.094	+0.149	<.001	<.001	3	15
STAD	Nucleus organization →	+0.072	+0.121	<.001	<.001	3	15
ESCA	Recombinational repair →	+0.062	+0.071	<.001	.001	3	15
ESCA	rRNA metabolic process →	+0.085	+0.121	<.001	<.001	3	15
STAD	Peptidyl-lysine modification →	+0.065	+0.119	<.001	<.001	3	15
STAD	Regulation of centrosome cycle →	+0.065	+0.107	<.001	<.001	3	15

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,982 associations by consensus.

Ribosomal small subunit biogenesis by LINC02199 expression — ESCA

Explore this box plot interactively →