LINC02193

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, LINC02193 mutation is significantly associated with the RNA expression of many other genes, with 13 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible LINC02193-associated genes across cancer lineages are MIR3121, NIPA2P3, and CA15P2. Each is linked with LINC02193 in more than 1 cancer types. Because this analysis shows association rather than direction, both LINC02193-to-partner and partner-to-LINC02193 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, MIR3121 grouped by LINC02193-low versus LINC02193-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC02193→partner) and Y-score (partner→LINC02193) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECMIR3121 →+1.067+6.582<.001.00131
UCECNIPA2P3 →+0.138+6.582<.001.00131
UCECCA15P2 →+0.159+5.031<.001.00931
UCECSNORA10B →+0.679+5.031<.001.00931
UCECRNU2-48P →+0.855+7.245<.001<.00131
UCECPCNPP2 →+0.149+6.226<.001.00131
Each partner links to its Q-omics profile. Showing the 6 strongest of 13 associations by consensus.

MIR3121 by LINC02193 expression — UCEC

Box plot of MIR3121 in LINC02193-low vs LINC02193-high samples in UCEC.

Explore this box plot interactively →

Exploration