LINC02147

Across TCGA pan-cancer cohorts, LINC02147 RNA differs between tumor and matched normal tissue in 14 of 18 cancer types tested, making tumor–normal expression one of LINC02147’s most consistent transcriptional readouts.

The strongest signal is observed in kidney renal papillary cell carcinoma (KIRP), where LINC02147 RNA is repressed in tumor relative to normal tissue. In most cancer types LINC02147 is over-expressed in tumor, although a few such as KIRP and HNSC show the opposite, repressed pattern.

KIRP, HNSC, and KIRC are the cancer types where LINC02147 tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in LINC02147 RNA (log₂); positive values indicate higher expression in tumor. p-values are from the differential-expression test.

Lineage	Gender	Stage	Fold-change	p	Sampling consensus
KIRP	Male	III,IV	−0.717	<.001	11	view →
HNSC	Male	IV	−0.433	<.001	11	view →
KIRC	Male	All	−0.414	<.001	11	view →
COAD	Male	II,III,IV	−0.317	<.001	11	view →
KICH	Female	All	−0.820	<.001	10	view →
THCA	Male	III,IV	−0.544	<.001	10	view →
LUAD	Female	II,III,IV	−0.401	<.001	10	view →
UCEC	All	All	−0.745	<.001	8	view →
LUSC	Female	All	−0.560	<.001	8	view →
BLCA	Female	All	−0.442	<.001	8	view →
STAD	All	All	−0.270	<.001	8	view →
BRCA	Female	II,III,IV	−0.284	<.001	6	view →

Pink = over-expressed in tumor, green = repressed in tumor. Showing the 12 strongest of 14 lineages.

LINC02147–KIRP

Open the KIRP breakdown →