LINC02122

Across TCGA patient cohorts, LINC02122 RNA expression is significantly associated with the go_rna of many other GO terms, with 5,318 significant associations in total. HNSC shows the largest number of these associations.

The most reproducible LINC02122-associated GO terms across cancer lineages are Cellular response to topologically incorrect protein, ATP synthesis coupled electron transport, and Vesicle transport along microtubule. Each is linked with LINC02122 in more than 7 cancer types. Because this analysis shows association rather than direction, both LINC02122-to-partner and partner-to-LINC02122 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Cellular response to topologically incorrect protein grouped by LINC02122-low versus LINC02122-high in SKCM.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC02122→partner) and Y-score (partner→LINC02122) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
SKCM	Cellular response to topologically incorrect protein →	+0.033	+0.010	<.001	.001	3	7
HNSC	ATP synthesis coupled electron transport →	+0.029	+0.106	<.001	<.001	3	7
SKCM	Vesicle transport along microtubule →	+0.030	+0.009	<.001	.002	3	7
ESCA	Phosphatidylcholine biosynthetic process →	+0.040	+0.328	.002	.003	2	8
PAAD	Phosphatidylcholine metabolic process →	+0.026	+0.646	<.001	<.001	3	7
HNSC	NADH dehydrogenase complex assembly →	+0.026	+0.111	<.001	<.001	3	6

Each partner links to its Q-omics profile. Showing the 6 strongest of 5,318 associations by consensus.

Cellular response to topologically incorrect protein by LINC02122 expression — SKCM

Explore this box plot interactively →