LINC02117

Across TCGA patient cohorts, LINC02117 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,469 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC02117-associated GO terms across cancer lineages are Base-excision repair, Regulation of double-strand break repair, and Mismatch repair. Each is linked with LINC02117 in more than 14 cancer types. Because this analysis shows association rather than direction, both LINC02117-to-partner and partner-to-LINC02117 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Base-excision repair grouped by LINC02117-low versus LINC02117-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC02117→partner) and Y-score (partner→LINC02117) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Base-excision repair →	+0.063	+0.164	<.001	<.001	3	15
STAD	Regulation of double-strand break repair →	+0.059	+0.154	<.001	<.001	3	14
STAD	Mismatch repair →	+0.053	+0.144	<.001	<.001	3	14
ESCA	Regulation of microtubule cytoskeleton organization →	+0.057	+0.181	<.001	<.001	3	14
STAD	3'-UTR-mediated mRNA stabilization →	+0.057	+0.151	<.001	<.001	3	14
STAD	Regulation of DNA repair →	+0.063	+0.162	<.001	<.001	3	13

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,469 associations by consensus.

Base-excision repair by LINC02117 expression — STAD

Explore this box plot interactively →