LINC02090

Across TCGA pan-cancer cohorts, LINC02090 RNA differs between tumor and matched normal tissue in 3 of 18 cancer types tested, making tumor–normal expression one of LINC02090’s most consistent transcriptional readouts.

The strongest signal is observed in breast invasive carcinoma (BRCA), where LINC02090 RNA is repressed in tumor relative to normal tissue. In most cancer types LINC02090 is over-expressed in tumor, although a few such as BRCA and STAD show the opposite, repressed pattern.

BRCA, STAD, and COAD are the cancer types where LINC02090 tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in LINC02090 RNA (log₂); positive values indicate higher expression in tumor. p-values are from the differential-expression test.

Lineage	Gender	Stage	Fold-change	p	Sampling consensus
BRCA	All	II,III,IV	−0.055	.008	4	view →
STAD	Male	IV	−0.580	.024	2	view →
COAD	All	All	−0.064	.038	1	view →

Pink = over-expressed in tumor, green = repressed in tumor. Showing the 3 strongest of 3 lineages.

LINC02090–BRCA

Open the BRCA breakdown →