LINC02084

RNA — tumor vs normal
Tumor vs NormalRNABox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, LINC02084 RNA differs between tumor and matched normal tissue in 12 of 18 cancer types tested, making tumor–normal expression one of LINC02084’s most consistent transcriptional readouts.

The strongest signal is observed in kidney renal clear cell carcinoma (KIRC), where LINC02084 RNA is more highly expressed in tumor relative to normal tissue. In most cancer types LINC02084 is over-expressed in tumor, although a few such as THCA and LUSC show the opposite, repressed pattern.

KIRC, THCA, and HNSC are the cancer types where LINC02084 tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in LINC02084 RNA (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
KIRCMaleII,III,IV+0.977<.00111view →
THCAAllII,III,IV−0.358.0029view →
HNSCAllII,III,IV+0.341<.0018view →
LUSCMaleIII,IV−1.565<.0016view →
UCECAllII,III,IV−0.505<.0016view →
LUADAllIII,IV−0.499.0013view →
PRADAllAll−0.214.0172view →
STADAllAll+0.607.0421view →
BLCAAllIV−0.505.0201view →
KICHMaleAll−0.287.0361view →
LIHCMaleAll−0.235.0391view →
KIRPAllAll+0.223.0351view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 12 strongest of 12 lineages.

LINC02084–KIRC

Tumor-vs-normal expression box plot for LINC02084 RNA in KIRC.

Open the KIRC breakdown →

Exploration