LINC02079

Across TCGA patient cohorts, LINC02079 mutation is significantly associated with the RNA expression of many other genes, with 2,476 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible LINC02079-associated genes across cancer lineages are PAPLN, CPE, and PSMD9. Each is linked with LINC02079 in more than 1 cancer types. Because this analysis shows association rather than direction, both LINC02079-to-partner and partner-to-LINC02079 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, PAPLN grouped by LINC02079-low versus LINC02079-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC02079→partner) and Y-score (partner→LINC02079) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
UCEC	PAPLN →	-0.793	-3.071	<.001	<.001	3	2
UCEC	CPE →	-1.141	-2.906	<.001	.001	3	2
UCEC	PSMD9 →	+0.383	+2.137	<.001	.001	3	2
UCEC	WNT6 →	-0.935	-2.390	.004	.003	3	2
UCEC	ATP1B2 →	-0.707	-2.126	.001	.001	3	2
UCEC	ENPP2 →	-0.793	-2.898	.001	.001	3	2

Each partner links to its Q-omics profile. Showing the 6 strongest of 2,476 associations by consensus.

PAPLN by LINC02079 expression — UCEC

Explore this box plot interactively →