LINC02069

RNA — tumor vs normal
Tumor vs NormalRNABox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, LINC02069 RNA differs between tumor and matched normal tissue in 2 of 18 cancer types tested, making tumor–normal expression one of LINC02069’s most consistent transcriptional readouts.

The strongest signal is observed in head and neck squamous cell carcinoma (HNSC), where LINC02069 RNA is more highly expressed in tumor relative to normal tissue. In most cancer types LINC02069 is over-expressed in tumor.

HNSC and LUAD are the cancer types where LINC02069 tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in LINC02069 RNA (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
HNSCMaleII,III,IV+0.020.0214view →
LUADAllAll+0.027.0171view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 2 strongest of 2 lineages.

LINC02069–HNSC

Tumor-vs-normal expression box plot for LINC02069 RNA in HNSC.

Open the HNSC breakdown →

Exploration