LINC02059

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, LINC02059 RNA expression is significantly associated with the protein abundance of many other proteins, with 6,147 significant associations in total. PDAC shows the largest number of these associations.

The most reproducible LINC02059-associated proteins across cancer lineages are SEC11C, CDKN2C, and DOCK8. Each is linked with LINC02059 in more than 3 cancer types. Because this analysis shows association rather than direction, both LINC02059-to-partner and partner-to-LINC02059 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC02059 versus SEC11C in LSCC, with a Pearson correlation of 0.32.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC02059→partner) and Y-score (partner→LINC02059) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCSEC11C →+0.986+0.143<.001<.00133
GBMCDKN2C →+0.609+0.194<.001.00933
LSCCDOCK8 →+0.581+0.189<.001.00633
LSCCGMPPA →+0.436+0.149<.001.00933
HNSCHID1 →+0.550+0.163<.001.00233
LSCCIRF4 →+0.818+0.123<.001.00433
Each partner links to its Q-omics profile. Showing the 6 strongest of 6,147 associations by consensus.

LINC02059 vs SEC11C — LSCC

Per-sample scatter of LINC02059 vs SEC11C in LSCC (Pearson r = 0.32).

Explore this scatter interactively →

Exploration