LINC02039

Across TCGA patient cohorts, LINC02039 RNA expression is significantly associated with the go_rna of many other GO terms, with 5,967 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC02039-associated GO terms across cancer lineages are Methylation, Positive regulation of DNA metabolic process, and Respiratory system development. Each is linked with LINC02039 in more than 8 cancer types. Because this analysis shows association rather than direction, both LINC02039-to-partner and partner-to-LINC02039 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Methylation grouped by LINC02039-low versus LINC02039-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC02039→partner) and Y-score (partner→LINC02039) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Methylation →	+0.106	+0.090	<.001	<.001	3	9
STAD	Positive regulation of DNA metabolic process →	+0.116	+0.081	<.001	<.001	3	8
STAD	Respiratory system development →	+0.086	+0.069	<.001	<.001	3	8
STAD	rRNA modification →	+0.113	+0.090	<.001	<.001	3	8
STAD	Regulation of DNA biosynthetic process →	+0.120	+0.073	<.001	<.001	3	7
STAD	Organelle fusion →	+0.113	+0.082	<.001	<.001	3	7

Each partner links to its Q-omics profile. Showing the 6 strongest of 5,967 associations by consensus.

Methylation by LINC02039 expression — STAD

Explore this box plot interactively →