LINC02029

Across TCGA patient cohorts, LINC02029 RNA expression is significantly associated with the go_rna of many other GO terms, with 7,002 significant associations in total. HNSC shows the largest number of these associations.

The most reproducible LINC02029-associated GO terms across cancer lineages are Nucleobase-containing small molecule interconversion, Positive regulation of prostaglandin biosynthetic process, and Negative regulation of intrinsic apoptotic signaling pathway in response to osmotic stress. Each is linked with LINC02029 in more than 13 cancer types. Because this analysis shows association rather than direction, both LINC02029-to-partner and partner-to-LINC02029 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Nucleobase-containing small molecule interconversion grouped by LINC02029-low versus LINC02029-high in ESCA.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC02029→partner) and Y-score (partner→LINC02029) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
ESCA	Nucleobase-containing small molecule interconversion →	+0.055	+0.172	<.001	<.001	3	14
LGG	Positive regulation of prostaglandin biosynthetic process →	+0.066	+0.147	<.001	<.001	3	11
KIRP	Negative regulation of intrinsic apoptotic signaling pathway in response to osmotic stress →	+0.046	+0.212	<.001	<.001	3	11
GBM	Acute inflammatory response →	+0.031	+0.196	<.001	<.001	3	10
PAAD	Establishment of skin barrier →	+0.059	+0.138	<.001	<.001	3	10
STAD	Multi-multicellular organism process →	+0.038	+0.085	<.001	<.001	2	11

Each partner links to its Q-omics profile. Showing the 6 strongest of 7,002 associations by consensus.

Nucleobase-containing small molecule interconversion by LINC02029 expression — ESCA

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