LINC02008

Across TCGA patient cohorts, LINC02008 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,684 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC02008-associated GO terms across cancer lineages are Sister chromatid segregation, Signal transduction in response to DNA damage, and tRNA metabolic process. Each is linked with LINC02008 in more than 13 cancer types. Because this analysis shows association rather than direction, both LINC02008-to-partner and partner-to-LINC02008 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Sister chromatid segregation grouped by LINC02008-low versus LINC02008-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC02008→partner) and Y-score (partner→LINC02008) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Sister chromatid segregation →	+0.075	+0.108	<.001	<.001	3	14
ESCA	Signal transduction in response to DNA damage →	+0.073	+0.137	<.001	.003	3	13
ESCA	tRNA metabolic process →	+0.070	+0.163	<.001	.001	2	14
ESCA	Ribose phosphate biosynthetic process →	+0.065	+0.153	<.001	.001	3	13
ESCA	Mitotic nuclear division →	+0.076	+0.159	<.001	.001	3	12
STAD	DNA replication →	+0.067	+0.112	<.001	<.001	3	12

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,684 associations by consensus.

Sister chromatid segregation by LINC02008 expression — STAD

Explore this box plot interactively →