LINC02006

Across TCGA patient cohorts, LINC02006 RNA expression is significantly associated with the protein abundance of many other proteins, with 10,900 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible LINC02006-associated proteins across cancer lineages are PSMB10, PSMB6, and TYMP. Each is linked with LINC02006 in more than 4 cancer types. Because this analysis shows association rather than direction, both LINC02006-to-partner and partner-to-LINC02006 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC02006 versus PSMB10 in BRCA, with a Pearson correlation of 0.25.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC02006→partner) and Y-score (partner→LINC02006) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
BRCA	PSMB10 →	+0.511	+0.151	<.001	<.001	3	5
LUAD	PSMB6 →	-0.504	-0.600	<.001	<.001	3	5
UCEC	TYMP →	+0.747	+0.751	<.001	<.001	3	5
BRCA	GBP1 →	+0.868	+0.222	<.001	<.001	3	5
CCRCC	GBP4 →	+0.770	+0.538	<.001	<.001	3	5
OV	HLA-DRA →	+0.727	+0.367	.004	.001	3	5

Each partner links to its Q-omics profile. Showing the 6 strongest of 10,900 associations by consensus.

LINC02006 vs PSMB10 — BRCA

Explore this scatter interactively →