LINC02003

Across TCGA patient cohorts, LINC02003 RNA expression is significantly associated with the protein abundance of many other proteins, with 10,497 significant associations in total. HNSC shows the largest number of these associations.

The most reproducible LINC02003-associated proteins across cancer lineages are PTPRF, CASK, and ZC3H12D. Each is linked with LINC02003 in more than 3 cancer types. Because this analysis shows association rather than direction, both LINC02003-to-partner and partner-to-LINC02003 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC02003 versus PTPRF in HNSC, with a Pearson correlation of 0.30.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC02003→partner) and Y-score (partner→LINC02003) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
HNSC	PTPRF →	+0.654	+0.639	<.001	<.001	3	4
GBM	CASK →	+0.378	+0.589	<.001	<.001	3	4
HNSC	ZC3H12D →	-0.932	-0.776	<.001	<.001	3	3
LSCC	TNS2_S120 →	-0.427	-0.490	.002	.001	3	3
LSCC	PRDM1_S272 →	-0.879	-0.598	<.001	.003	3	3
OV	PRTFDC1 →	+0.626	+0.464	<.001	<.001	3	3

Each partner links to its Q-omics profile. Showing the 6 strongest of 10,497 associations by consensus.

LINC02003 vs PTPRF — HNSC

Explore this scatter interactively →