LINC02000

Across TCGA patient cohorts, LINC02000 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,302 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible LINC02000-associated GO terms across cancer lineages are Regulation of programmed necrotic cell death, Glycosyl compound catabolic process, and Type II interferon-mediated signaling pathway. Each is linked with LINC02000 in more than 15 cancer types. Because this analysis shows association rather than direction, both LINC02000-to-partner and partner-to-LINC02000 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Regulation of programmed necrotic cell death grouped by LINC02000-low versus LINC02000-high in ESCA.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC02000→partner) and Y-score (partner→LINC02000) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
ESCA	Regulation of programmed necrotic cell death →	+0.051	+0.177	<.001	<.001	3	16
STAD	Glycosyl compound catabolic process →	+0.040	+0.221	<.001	<.001	2	16
STAD	Type II interferon-mediated signaling pathway →	+0.058	+0.226	<.001	<.001	2	16
ESCA	Antigen processing and presentation of endogenous antigen →	+0.072	+0.265	<.001	<.001	3	15
SKCM	Antigen processing and presentation of endogenous peptide antigen →	+0.064	+0.009	<.001	.005	2	16
BRCA	Regulation of tolerance induction →	+0.062	+0.046	<.001	<.001	3	15

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,302 associations by consensus.

Regulation of programmed necrotic cell death by LINC02000 expression — ESCA

Explore this box plot interactively →