LINC01982

Across TCGA patient cohorts, LINC01982 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,958 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC01982-associated GO terms across cancer lineages are Retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum, Positive regulation of canonical NF-kappaB signal transduction, and Regulation of viral genome replication. Each is linked with LINC01982 in more than 19 cancer types. Because this analysis shows association rather than direction, both LINC01982-to-partner and partner-to-LINC01982 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum grouped by LINC01982-low versus LINC01982-high in ESCA.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01982→partner) and Y-score (partner→LINC01982) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
ESCA	Retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum →	+0.067	+0.560	<.001	<.001	3	20
ESCA	Positive regulation of canonical NF-kappaB signal transduction →	+0.053	+0.375	<.001	<.001	3	20
ESCA	Regulation of viral genome replication →	+0.056	+0.397	<.001	<.001	3	18
STAD	Regulation of viral process →	+0.052	+0.286	<.001	<.001	3	17
ESCA	Canonical NF-kappaB signal transduction →	+0.046	+0.416	<.001	<.001	3	17
STAD	Activation of innate immune response →	+0.046	+0.262	<.001	<.001	3	17

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,958 associations by consensus.

Retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum by LINC01982 expression — ESCA

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