LINC01971

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, LINC01971 RNA expression is significantly associated with the protein abundance of many other proteins, with 10,672 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible LINC01971-associated proteins across cancer lineages are MLPH, CDK1, and NRF1_S136. Each is linked with LINC01971 in more than 3 cancer types. Because this analysis shows association rather than direction, both LINC01971-to-partner and partner-to-LINC01971 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC01971 versus MLPH in BRCA, with a Pearson correlation of -0.53.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01971→partner) and Y-score (partner→LINC01971) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCAMLPH →-0.760-0.367<.001<.00134
BRCACDK1 →+0.802+0.602<.001<.00134
LSCCNRF1_S136 →+1.161+0.367<.001<.00134
BRCANUDT1 →+0.366+0.376<.001.00534
BRCAZNF462_S688 →+1.478+0.507<.001<.00134
BRCACOIL_T303 →+1.144+0.625<.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 10,672 associations by consensus.

LINC01971 vs MLPH — BRCA

Per-sample scatter of LINC01971 vs MLPH in BRCA (Pearson r = -0.53).

Explore this scatter interactively →

Exploration