LINC01966

Across TCGA patient cohorts, LINC01966 RNA expression is significantly associated with the go_rna of many other GO terms, with 5,178 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC01966-associated GO terms across cancer lineages are Ribose phosphate biosynthetic process, Establishment of protein localization to membrane, and Protein targeting to membrane. Each is linked with LINC01966 in more than 10 cancer types. Because this analysis shows association rather than direction, both LINC01966-to-partner and partner-to-LINC01966 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Ribose phosphate biosynthetic process grouped by LINC01966-low versus LINC01966-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01966→partner) and Y-score (partner→LINC01966) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Ribose phosphate biosynthetic process →	+0.115	+0.028	<.001	<.001	3	11
STAD	Establishment of protein localization to membrane →	+0.114	+0.050	<.001	<.001	3	11
STAD	Protein targeting to membrane →	+0.108	+0.053	<.001	<.001	3	10
STAD	Telomerase RNA localization →	+0.121	+0.029	<.001	<.001	3	9
STAD	Carbohydrate catabolic process →	+0.091	+0.041	<.001	<.001	3	9
STAD	Peptidyl-lysine modification →	+0.098	+0.049	<.001	<.001	3	9

Each partner links to its Q-omics profile. Showing the 6 strongest of 5,178 associations by consensus.

Ribose phosphate biosynthetic process by LINC01966 expression — STAD

Explore this box plot interactively →