LINC01964

Across TCGA patient cohorts, LINC01964 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,859 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC01964-associated GO terms across cancer lineages are Positive regulation of DNA metabolic process, Regulation of translational initiation, and Positive regulation of transcription by RNA polymerase III. Each is linked with LINC01964 in more than 14 cancer types. Because this analysis shows association rather than direction, both LINC01964-to-partner and partner-to-LINC01964 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Positive regulation of DNA metabolic process grouped by LINC01964-low versus LINC01964-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01964→partner) and Y-score (partner→LINC01964) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Positive regulation of DNA metabolic process →	+0.070	+0.119	<.001	<.001	3	15
STAD	Regulation of translational initiation →	+0.072	+0.106	<.001	<.001	3	14
STAD	Positive regulation of transcription by RNA polymerase III →	+0.065	+0.119	<.001	<.001	3	14
STAD	Peptidyl-lysine modification →	+0.065	+0.120	<.001	<.001	3	14
STAD	Base-excision repair →	+0.070	+0.115	<.001	<.001	3	13
STAD	Protein export from nucleus →	+0.068	+0.116	<.001	<.001	3	13

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,859 associations by consensus.

Positive regulation of DNA metabolic process by LINC01964 expression — STAD

Explore this box plot interactively →