LINC01961

Across TCGA patient cohorts, LINC01961 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,437 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC01961-associated GO terms across cancer lineages are Positive regulation of DNA metabolic process, Negative regulation of cytoskeleton organization, and Regulation of proteasomal protein catabolic process. Each is linked with LINC01961 in more than 12 cancer types. Because this analysis shows association rather than direction, both LINC01961-to-partner and partner-to-LINC01961 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Positive regulation of DNA metabolic process grouped by LINC01961-low versus LINC01961-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01961→partner) and Y-score (partner→LINC01961) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Positive regulation of DNA metabolic process →	+0.063	+0.127	<.001	<.001	3	13
STAD	Negative regulation of cytoskeleton organization →	+0.050	+0.102	<.001	<.001	3	13
STAD	Regulation of proteasomal protein catabolic process →	+0.066	+0.116	<.001	<.001	3	13
STAD	Regulation of DNA repair →	+0.063	+0.118	<.001	<.001	3	13
STAD	tRNA metabolic process →	+0.064	+0.111	<.001	<.001	3	13
STAD	Telomere maintenance →	+0.065	+0.124	<.001	<.001	3	13

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,437 associations by consensus.

Positive regulation of DNA metabolic process by LINC01961 expression — STAD

Explore this box plot interactively →