LINC01960

Across TCGA patient cohorts, LINC01960 RNA expression is significantly associated with the protein abundance of many other proteins, with 7,875 significant associations in total. GBM shows the largest number of these associations.

The most reproducible LINC01960-associated proteins across cancer lineages are RCN3, ECM1, and MRPL3. Each is linked with LINC01960 in more than 4 cancer types. Because this analysis shows association rather than direction, both LINC01960-to-partner and partner-to-LINC01960 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC01960 versus RCN3 in GBM, with a Pearson correlation of 0.39.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01960→partner) and Y-score (partner→LINC01960) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
GBM	RCN3 →	+0.664	+0.158	.001	.002	3	5
OV	ECM1 →	+0.518	+0.206	<.001	<.001	3	5
COAD	MRPL3 →	-0.387	-0.183	<.001	<.001	3	4
UCEC	MRPL50 →	-0.291	-0.562	<.001	.002	3	4
GBM	NNMT →	+0.923	+0.187	.004	.004	3	4
OV	P3H1 →	+0.522	+0.208	<.001	<.001	3	4

Each partner links to its Q-omics profile. Showing the 6 strongest of 7,875 associations by consensus.

LINC01960 vs RCN3 — GBM

Explore this scatter interactively →