LINC01956

Across TCGA patient cohorts, LINC01956 RNA expression is significantly associated with the protein abundance of many other proteins, with 10,312 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible LINC01956-associated proteins across cancer lineages are GMPS, NUP62, and NUP93. Each is linked with LINC01956 in more than 3 cancer types. Because this analysis shows association rather than direction, both LINC01956-to-partner and partner-to-LINC01956 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC01956 versus GMPS in BRCA, with a Pearson correlation of 0.50.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01956→partner) and Y-score (partner→LINC01956) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
BRCA	GMPS →	+0.385	+1.932	<.001	<.001	3	4
BRCA	NUP62 →	+0.224	+1.864	<.001	<.001	3	3
BRCA	NUP93 →	+0.144	+1.425	<.001	<.001	3	3
BRCA	TUBB6 →	+0.520	+1.513	<.001	<.001	3	3
OV	ZKSCAN1 →	-0.330	-0.068	.001	.002	3	3
OV	PEBP1 →	-0.386	-0.087	.004	.001	3	3

Each partner links to its Q-omics profile. Showing the 6 strongest of 10,312 associations by consensus.

LINC01956 vs GMPS — BRCA

Explore this scatter interactively →