LINC01954

Across TCGA patient cohorts, LINC01954 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,960 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC01954-associated GO terms across cancer lineages are Reactive oxygen species metabolic process, Oxidative phosphorylation, and Superoxide metabolic process. Each is linked with LINC01954 in more than 14 cancer types. Because this analysis shows association rather than direction, both LINC01954-to-partner and partner-to-LINC01954 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Reactive oxygen species metabolic process grouped by LINC01954-low versus LINC01954-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01954→partner) and Y-score (partner→LINC01954) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Reactive oxygen species metabolic process →	+0.041	+0.242	<.001	<.001	2	15
ESCA	Oxidative phosphorylation →	+0.058	+0.373	.004	<.001	2	14
STAD	Superoxide metabolic process →	+0.040	+0.200	<.001	.003	2	14
STAD	Ribose phosphate biosynthetic process →	+0.064	+0.291	<.001	<.001	3	13
ESCA	Mitochondrial electron transport, NADH to ubiquinone →	+0.051	+0.231	<.001	.001	3	12
STAD	Monocarboxylic acid biosynthetic process →	+0.036	+0.379	<.001	<.001	3	12

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,960 associations by consensus.

Reactive oxygen species metabolic process by LINC01954 expression — STAD

Explore this box plot interactively →