LINC01948

Across TCGA patient cohorts, LINC01948 RNA expression is significantly associated with the protein abundance of many other proteins, with 13,886 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible LINC01948-associated proteins across cancer lineages are TYMS, VEZF1, and RRM2_S20. Each is linked with LINC01948 in more than 3 cancer types. Because this analysis shows association rather than direction, both LINC01948-to-partner and partner-to-LINC01948 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC01948 versus TYMS in UCEC, with a Pearson correlation of -0.42.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01948→partner) and Y-score (partner→LINC01948) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
UCEC	TYMS →	-0.692	-0.840	<.001	<.001	3	4
BRCA	VEZF1 →	+0.531	+0.988	<.001	<.001	3	4
LUAD	RRM2_S20 →	-1.236	-0.557	<.001	<.001	3	4
CCRCC	SEPTIN8 →	+0.274	+0.633	.003	<.001	3	4
BRCA	TET2_S99 →	-0.853	-1.244	<.001	<.001	3	4
BRCA	CDKAL1 →	-0.306	-0.860	<.001	<.001	3	4

Each partner links to its Q-omics profile. Showing the 6 strongest of 13,886 associations by consensus.

LINC01948 vs TYMS — UCEC

Explore this scatter interactively →