LINC01942

Across TCGA patient cohorts, LINC01942 RNA expression is significantly associated with the protein abundance of many other proteins, with 11,982 significant associations in total. LUAD shows the largest number of these associations.

The most reproducible LINC01942-associated proteins across cancer lineages are HNMT, CYFIP2, and FUNDC2. Each is linked with LINC01942 in more than 4 cancer types. Because this analysis shows association rather than direction, both LINC01942-to-partner and partner-to-LINC01942 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC01942 versus HNMT in LSCC, with a Pearson correlation of 0.33.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01942→partner) and Y-score (partner→LINC01942) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LSCC	HNMT →	+0.433	+0.674	<.001	<.001	3	5
LSCC	CYFIP2 →	+0.489	+0.629	<.001	<.001	3	4
LUAD	FUNDC2 →	+0.362	+0.985	.001	<.001	3	4
GBM	PLEKHA6 →	+0.391	+0.269	.001	<.001	3	4
BRCA	SEMA4D →	+0.417	+0.162	<.001	.001	3	4
COAD	QPRT →	+0.550	+0.781	.001	<.001	3	4

Each partner links to its Q-omics profile. Showing the 6 strongest of 11,982 associations by consensus.

LINC01942 vs HNMT — LSCC

Explore this scatter interactively →