LINC01938

Across TCGA patient cohorts, LINC01938 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,328 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC01938-associated GO terms across cancer lineages are Telomere maintenance, Regulation of microtubule-based process, and Nucleobase-containing compound transport. Each is linked with LINC01938 in more than 9 cancer types. Because this analysis shows association rather than direction, both LINC01938-to-partner and partner-to-LINC01938 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Telomere maintenance grouped by LINC01938-low versus LINC01938-high in ESCA.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01938→partner) and Y-score (partner→LINC01938) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
ESCA	Telomere maintenance →	+0.064	+0.088	<.001	<.001	3	10
ESCA	Regulation of microtubule-based process →	+0.050	+0.077	<.001	<.001	3	10
STAD	Nucleobase-containing compound transport →	+0.062	+0.125	<.001	<.001	3	10
ESCA	Response to toxic substance →	+0.049	+0.168	<.001	<.001	3	9
STAD	Nucleoside phosphate biosynthetic process →	+0.061	+0.113	<.001	<.001	3	9
ESCA	Regulation of cell cycle G2/M phase transition →	+0.097	+0.137	<.001	<.001	3	9

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,328 associations by consensus.

Telomere maintenance by LINC01938 expression — ESCA

Explore this box plot interactively →