LINC01933

Across TCGA patient cohorts, LINC01933 RNA expression is significantly associated with the go_rna of many other GO terms, with 7,139 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC01933-associated GO terms across cancer lineages are Macromolecule deacylation, Regulation of DNA repair, and Macromolecule methylation. Each is linked with LINC01933 in more than 27 cancer types. Because this analysis shows association rather than direction, both LINC01933-to-partner and partner-to-LINC01933 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Macromolecule deacylation grouped by LINC01933-low versus LINC01933-high in ESCA.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01933→partner) and Y-score (partner→LINC01933) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
ESCA	Macromolecule deacylation →	+0.066	+0.195	<.001	<.001	3	28
ESCA	Regulation of DNA repair →	+0.074	+0.191	.001	<.001	3	27
ESCA	Macromolecule methylation →	+0.068	+0.176	.001	<.001	3	27
ESCA	Positive regulation of double-strand break repair via homologous recombination →	+0.078	+0.309	<.001	<.001	3	26
ESCA	Regulation of double-strand break repair →	+0.075	+0.280	<.001	<.001	3	26
STAD	Positive regulation of double-strand break repair →	+0.061	+0.106	<.001	<.001	3	26

Each partner links to its Q-omics profile. Showing the 6 strongest of 7,139 associations by consensus.

Macromolecule deacylation by LINC01933 expression — ESCA

Explore this box plot interactively →