LINC01897

Across TCGA patient cohorts, LINC01897 RNA expression is significantly associated with the go_rna of many other GO terms, with 5,090 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible LINC01897-associated GO terms across cancer lineages are Aerobic respiration, Succinyl-CoA metabolic process, and Positive regulation of defense response to bacterium. Each is linked with LINC01897 in more than 5 cancer types. Because this analysis shows association rather than direction, both LINC01897-to-partner and partner-to-LINC01897 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Aerobic respiration grouped by LINC01897-low versus LINC01897-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01897→partner) and Y-score (partner→LINC01897) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Aerobic respiration →	+0.080	+0.195	<.001	.002	2	6
STAD	Succinyl-CoA metabolic process →	+0.050	+0.189	<.001	<.001	3	4
MESO	Positive regulation of defense response to bacterium →	+0.047	+0.109	.001	.002	3	4
STAD	Negative regulation of chemokine production →	+0.045	+0.131	<.001	.009	1	6
OV	Regulation of collagen fibril organization →	+0.054	+0.137	<.001	<.001	3	4
UCEC	Oxidative phosphorylation →	+0.025	+0.062	<.001	<.001	3	4

Each partner links to its Q-omics profile. Showing the 6 strongest of 5,090 associations by consensus.

Aerobic respiration by LINC01897 expression — STAD

Explore this box plot interactively →