LINC01896

Across TCGA patient cohorts, LINC01896 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,626 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC01896-associated GO terms across cancer lineages are Polyamine metabolic process, Protein-RNA complex organization, and NADH dehydrogenase complex assembly. Each is linked with LINC01896 in more than 9 cancer types. Because this analysis shows association rather than direction, both LINC01896-to-partner and partner-to-LINC01896 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Polyamine metabolic process grouped by LINC01896-low versus LINC01896-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01896→partner) and Y-score (partner→LINC01896) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Polyamine metabolic process →	+0.052	+0.030	<.001	<.001	3	10
STAD	Protein-RNA complex organization →	+0.060	+0.031	<.001	<.001	3	9
STAD	NADH dehydrogenase complex assembly →	+0.074	+0.034	<.001	<.001	3	9
STAD	Proton motive force-driven ATP synthesis →	+0.078	+0.030	<.001	<.001	3	9
STAD	snRNA processing →	+0.061	+0.030	<.001	<.001	3	9
STAD	Regulation of DNA-templated transcription elongation →	+0.062	+0.048	<.001	.001	3	9

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,626 associations by consensus.

Polyamine metabolic process by LINC01896 expression — STAD

Explore this box plot interactively →