LINC01889

Across TCGA patient cohorts, LINC01889 RNA expression is significantly associated with the RNA expression of many other genes, with 7,504 significant associations in total. TGCT shows the largest number of these associations.

The most reproducible LINC01889-associated genes across cancer lineages are ALOX15, EPB41L1, and MAPK10. Each is linked with LINC01889 in more than 8 cancer types. Because this analysis shows association rather than direction, both LINC01889-to-partner and partner-to-LINC01889 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC01889 versus ALOX15 in CESC, with a Pearson correlation of 0.14.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01889→partner) and Y-score (partner→LINC01889) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
CESC	ALOX15 →	+1.152	+0.344	<.001	<.001	3	9
BLCA	EPB41L1 →	+0.996	+0.868	<.001	<.001	3	9
TGCT	MAPK10 →	+1.065	+0.166	<.001	.001	3	8
BLCA	ELF5 →	+1.259	+0.680	<.001	<.001	3	8
TGCT	SLC15A2 →	+1.111	+0.312	<.001	.001	3	8
CESC	LINC01559 →	+1.130	+0.285	<.001	<.001	3	8

Each partner links to its Q-omics profile. Showing the 6 strongest of 7,504 associations by consensus.

LINC01889 vs ALOX15 — CESC

Explore this scatter interactively →