LINC01889

Across TCGA patient cohorts, LINC01889 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,168 significant associations in total. TGCT shows the largest number of these associations.

The most reproducible LINC01889-associated GO terms across cancer lineages are Maintenance of cell number, Establishment of endothelial intestinal barrier, and Morphogenesis of embryonic epithelium. Each is linked with LINC01889 in more than 8 cancer types. Because this analysis shows association rather than direction, both LINC01889-to-partner and partner-to-LINC01889 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Maintenance of cell number grouped by LINC01889-low versus LINC01889-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01889→partner) and Y-score (partner→LINC01889) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Maintenance of cell number →	+0.072	+0.158	<.001	<.001	3	9
STAD	Establishment of endothelial intestinal barrier →	+0.072	+0.167	<.001	<.001	3	8
STAD	Morphogenesis of embryonic epithelium →	+0.063	+0.158	<.001	<.001	3	8
STAD	Membrane lipid biosynthetic process →	+0.049	+0.164	<.001	<.001	3	8
STAD	Regulation of stem cell population maintenance →	+0.071	+0.123	<.001	<.001	3	7
STAD	Positive regulation of double-strand break repair →	+0.074	+0.178	<.001	<.001	3	7

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,168 associations by consensus.

Maintenance of cell number by LINC01889 expression — STAD

Explore this box plot interactively →