LINC01849

Across TCGA patient cohorts, LINC01849 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,624 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC01849-associated GO terms across cancer lineages are Substantia nigra development, Regulation of endosome size, and Negative regulation of transferase activity. Each is linked with LINC01849 in more than 8 cancer types. Because this analysis shows association rather than direction, both LINC01849-to-partner and partner-to-LINC01849 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Substantia nigra development grouped by LINC01849-low versus LINC01849-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01849→partner) and Y-score (partner→LINC01849) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Substantia nigra development →	+0.091	+0.122	<.001	<.001	3	9
STAD	Regulation of endosome size →	+0.077	+0.111	<.001	<.001	3	9
STAD	Negative regulation of transferase activity →	+0.086	+0.116	<.001	<.001	3	9
STAD	Establishment of protein localization to membrane →	+0.097	+0.115	<.001	<.001	3	9
STAD	Intracellular estrogen receptor signaling pathway →	+0.097	+0.120	<.001	<.001	3	8
STAD	Microtubule organizing center organization →	+0.086	+0.109	<.001	<.001	3	8

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,624 associations by consensus.

Substantia nigra development by LINC01849 expression — STAD

Explore this box plot interactively →