LINC01848

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, LINC01848 RNA expression is significantly associated with the protein abundance of many other proteins, with 5,388 significant associations in total. LUAD shows the largest number of these associations.

The most reproducible LINC01848-associated proteins across cancer lineages are C2CD2L_S426, DBN1_S134, and DNM1L_S529. Each is linked with LINC01848 in more than 1 cancer types. Because this analysis shows association rather than direction, both LINC01848-to-partner and partner-to-LINC01848 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC01848 versus C2CD2L_S426 in LSCC, with a Pearson correlation of 0.46.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01848→partner) and Y-score (partner→LINC01848) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCC2CD2L_S426 →+0.958+0.186.004.00832
PDACDBN1_S134 →+0.485+0.188.006<.00132
LUADDNM1L_S529 →-0.981-0.387<.001<.00132
LUADDNM1L_S542 →-0.981-0.387<.001<.00132
LUADLRBA_S1005 →-0.753-0.286<.001<.00132
LUADMAGED2_T72 →+0.477+0.313.001.00232
Each partner links to its Q-omics profile. Showing the 6 strongest of 5,388 associations by consensus.

LINC01848 vs C2CD2L_S426 — LSCC

Per-sample scatter of LINC01848 vs C2CD2L_S426 in LSCC (Pearson r = 0.46).

Explore this scatter interactively →

Exploration