LINC01833

Across TCGA patient cohorts, LINC01833 RNA expression is significantly associated with the RNA expression of many other genes, with 10,829 significant associations in total. TGCT shows the largest number of these associations.

The most reproducible LINC01833-associated genes across cancer lineages are SIX3, SIX3-AS1, and EPCAM. Each is linked with LINC01833 in more than 28 cancer types. Because this analysis shows association rather than direction, both LINC01833-to-partner and partner-to-LINC01833 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC01833 versus SIX3 in PCPG, with a Pearson correlation of 0.66.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01833→partner) and Y-score (partner→LINC01833) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
PCPG	SIX3 →	+2.765	+0.796	<.001	<.001	3	29
PCPG	SIX3-AS1 →	+2.007	+0.805	<.001	<.001	3	28
LIHC	EPCAM →	+2.315	+0.395	<.001	.001	3	18
ESCA	C2orf15 →	+0.908	+1.335	<.001	<.001	3	16
CESC	DNAH14 →	+0.507	+1.127	<.001	<.001	3	16
ESCA	GALNT12 →	+0.888	+1.293	<.001	<.001	3	15

Each partner links to its Q-omics profile. Showing the 6 strongest of 10,829 associations by consensus.

LINC01833 vs SIX3 — PCPG

Explore this scatter interactively →