LINC01833

Across TCGA patient cohorts, LINC01833 RNA expression is significantly associated with the go_rna of many other GO terms, with 7,014 significant associations in total. HNSC shows the largest number of these associations.

The most reproducible LINC01833-associated GO terms across cancer lineages are Regulation of microtubule-based process, Facultative heterochromatin formation, and DNA replication. Each is linked with LINC01833 in more than 16 cancer types. Because this analysis shows association rather than direction, both LINC01833-to-partner and partner-to-LINC01833 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Regulation of microtubule-based process grouped by LINC01833-low versus LINC01833-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01833→partner) and Y-score (partner→LINC01833) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Regulation of microtubule-based process →	+0.032	+0.786	<.001	<.001	2	17
ESCA	Facultative heterochromatin formation →	+0.044	+1.122	<.001	<.001	3	15
STAD	DNA replication →	+0.045	+0.714	<.001	<.001	3	15
STAD	Regulation of DNA replication →	+0.042	+0.728	<.001	<.001	3	15
STAD	Cytokinesis →	+0.039	+0.714	<.001	<.001	3	15
STAD	Regulation of double-strand break repair via homologous recombination →	+0.031	+0.582	<.001	<.001	2	15

Each partner links to its Q-omics profile. Showing the 6 strongest of 7,014 associations by consensus.

Regulation of microtubule-based process by LINC01833 expression — STAD

Explore this box plot interactively →