LINC01830

Across TCGA patient cohorts, LINC01830 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,340 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC01830-associated GO terms across cancer lineages are Microtubule-based transport, Regulation of neuron differentiation, and Response to toxic substance. Each is linked with LINC01830 in more than 6 cancer types. Because this analysis shows association rather than direction, both LINC01830-to-partner and partner-to-LINC01830 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Microtubule-based transport grouped by LINC01830-low versus LINC01830-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01830→partner) and Y-score (partner→LINC01830) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Microtubule-based transport →	+0.098	+0.069	<.001	<.001	3	7
STAD	Regulation of neuron differentiation →	+0.069	+0.067	<.001	<.001	3	7
STAD	Response to toxic substance →	+0.102	+0.073	<.001	<.001	3	7
STAD	Sterol metabolic process →	+0.097	+0.082	<.001	<.001	3	6
STAD	Cell fate specification →	+0.073	+0.065	<.001	<.001	3	6
STAD	Negative regulation of Wnt signaling pathway →	+0.102	+0.074	<.001	<.001	3	6

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,340 associations by consensus.

Microtubule-based transport by LINC01830 expression — STAD

Explore this box plot interactively →