LINC01829

Across TCGA patient cohorts, LINC01829 RNA expression is significantly associated with the protein abundance of many other proteins, with 13,783 significant associations in total. PDAC shows the largest number of these associations.

The most reproducible LINC01829-associated proteins across cancer lineages are ZNF638, SNRNP40, and PNN. Each is linked with LINC01829 in more than 4 cancer types. Because this analysis shows association rather than direction, both LINC01829-to-partner and partner-to-LINC01829 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC01829 versus ZNF638 in LSCC, with a Pearson correlation of 0.34.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01829→partner) and Y-score (partner→LINC01829) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LSCC	ZNF638 →	+0.255	+0.341	<.001	<.001	3	5
GBM	SNRNP40 →	+0.198	+0.223	<.001	.003	3	4
GBM	PNN →	+0.342	+0.331	<.001	<.001	3	4
LSCC	POGZ →	+0.311	+0.273	<.001	<.001	3	4
GBM	ADNP →	+0.458	+0.346	<.001	<.001	3	4
GBM	DHX9 →	+0.236	+0.291	<.001	<.001	3	4

Each partner links to its Q-omics profile. Showing the 6 strongest of 13,783 associations by consensus.

LINC01829 vs ZNF638 — LSCC

Explore this scatter interactively →