LINC01818

RNA — tumor vs normal
Tumor vs NormalRNABox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, LINC01818 RNA differs between tumor and matched normal tissue in 3 of 18 cancer types tested, making tumor–normal expression one of LINC01818’s most consistent transcriptional readouts.

The strongest signal is observed in liver hepatocellular carcinoma (LIHC), where LINC01818 RNA is repressed in tumor relative to normal tissue. In most cancer types LINC01818 is over-expressed in tumor, although a few such as LIHC and CHOL show the opposite, repressed pattern.

LIHC, CHOL, and UCEC are the cancer types where LINC01818 tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in LINC01818 RNA (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
LIHCFemaleII,III,IV−1.284<.0019view →
CHOLAllAll−1.588<.0015view →
UCECAllIV+0.495.0122view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 3 strongest of 3 lineages.

LINC01818–LIHC

Tumor-vs-normal expression box plot for LINC01818 RNA in LIHC.

Open the LIHC breakdown →

Exploration