LINC01808

Across TCGA patient cohorts, LINC01808 RNA expression is significantly associated with the protein abundance of many other proteins, with 2,485 significant associations in total. LUAD shows the largest number of these associations.

The most reproducible LINC01808-associated proteins across cancer lineages are PARVA_S19, RANBP3, and FBXO38_S737. Each is linked with LINC01808 in more than 1 cancer types. Because this analysis shows association rather than direction, both LINC01808-to-partner and partner-to-LINC01808 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC01808 versus PARVA_S19 in GBM, with a Pearson correlation of -0.72.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01808→partner) and Y-score (partner→LINC01808) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
GBM	PARVA_S19 →	-0.607	-0.336	.001	<.001	3	2
BRCA	RANBP3 →	+0.195	+0.048	.002	.005	3	2
HNSC	FBXO38_S737 →	+0.334	+0.490	.009	.006	3	2
CCRCC	TRIM14 →	-0.280	-0.130	<.001	.007	3	2
LSCC	BTC_T166 →	+1.066	+0.270	.003	.003	3	2
UCEC	GMPPB →	-0.228	-0.497	.002	.001	3	2

Each partner links to its Q-omics profile. Showing the 6 strongest of 2,485 associations by consensus.

LINC01808 vs PARVA_S19 — GBM

Explore this scatter interactively →